19 October 2017

How complacency is failing Canadian university students

The original title of my article was "How complacency is failing Canadian university students ". The editors changed it to "We need to seriously rethink the concept of final exams", which misses the point.


30 April 2017

The fish that were there (but didn't exist)


In 2001 and 2002 I was a postdoctoral fellow with AquaNet, one of the Networks of Centres of Excellence. AquaNet sponsored "39 research projects devoted to improving the country's aquaculture industry" (1). It's Board of Directors consisted of partners from academia, government, and industry.

For us at the University of British Columbia the question was this: When Atlantic salmon escape from B.C. fish farms, what are the chances that they establish viable populations on the Pacific coast? This question can be broken down into chances of breeding success, of juvenile survival, and of adult survival. I explored the question whether juvenile Pacific salmon and juvenile Atlantic salmon show different susceptibilities to predators.

For my experiments, I had to simulate a small creek in the laboratory. I set up three experimental arenas, large oval channels filled with water about 60 cm deep, pebbles and rocks of various sizes on the bottom. In April, I stocked each tank with 20 juvenile Pacific salmon and 20 juvenile Atlantic salmon, all about 30 mm long. I also stocked two of the tanks with two predators each, two adult steelhead trout of about 50 cm.

Twice a week I went into the lab, fished out all the juveniles from the experimental arenas, measured their length, weighed them, put them back, and restocked those juveniles that had been eaten by the steelheads, or gone missing otherwise.

The experiments did not go well. Yes, steelheads ate juvenile Atlantics slightly more frequently than Pacifics, but they didn't eat them frequently enough to infer a statistically significant difference (2).

In early July I abandoned the experiments. I left the experimental arenas intact, however, and informed the laboratory staff to feel free and help themselves to the steelheads for their summer barbeques.

When I returned in early October (3) to clear the arenas I was surprised to see that in one arena eleven juvenile salmon had survived and grown in length to about 12 to 14 cm. Nine of them were Pacifics, two were Atlantics.

That's when it struck me.

I immediately made my way to the principal investigator. He also directed experiments investigating spawning ground competition and food competition. The Pacifics had always won against the Atlantics.

"We have looked at the problem the wrong way," I said. "The issue is not how well the average Atlantic performs against the average Pacific, but how well the fittest Atlantics perform against the unfittest surviving Pacifics. The problem of invasive species is not an ecological problem. It is an evolutionary one."

The principal investigator looked at me for a while and then leaned forward at his desk.

"Michael," he said without menace. "We will have an AquaNet progress meeting before Christmas. Some of the directors will be there. What you have to understand is that nobody in AquaNet wants to hear any ideas that could shed a bad light on the aquaculture industry (4). Do you understand?"

I didn't.

You see, the purpose of Science is the pursuit of truth, not to serve political expediency. Yes, there are philosophical problems. Yes, we do have battles between schools of thought. Yes, causation is difficult to prove, and truth is always only provisional. But if you can't trust a scientist, who can you trust?

I went back to the lab that afternoon to dispose of the evidence. I sat down for a while and watched the two Atlantics swim around the pool. The denial of their existence had made me oddly fond of them.

I killed them with a bleeding heart. 

NOTES AND REFERENCES
(1) AquaNet ran from 1999 to 2006. It is interesting that although at the time AquaNet was quite a prestigious project, some fifteen years later it is hard to find any detailed information about it: http://www.nce-rce.gc.ca/Index_eng.asp (Accessed: 30 Mar 2017), http://www.nce-rce.gc.ca/_docs/reports/annual-annuel/Annual_Report_02-03_Rapport_Annuel-e.pdf (Accessed: 30 Mar 2017)
(2) Each adult steelhead trout ate one or two juvenile salmon per week. Before we decided on steelheads as a predator, we conducted preliminary experiments with cormorants. They were too efficient. It took four of them less than ten seconds to clear twenty juvenile Pacifics from a large holding tank.
(3) After the 9/11 attacks the cleaning of fish tanks was not a priority.
(4) To my knowledge there is no evidence that suggests the establishment of a viable Atlantic salmon population on the Pacific coast. But that does not mean that one day life will not find a way.


UPDATE, 6 APR 2017

In the meantime I have spoken to John Volpe from the University of Victoria(1). John is a specialist in Invasion Ecology. He and I first met during my time with AquaNet.

John told me that about a decade ago he had evidence "of multiple year classes of wild-reared Atlantics in multiple Van Island rivers. They were competitively equal to or superior to native juvenile salmonids and in some instances very numerous. Adults were prevalent in dozens of rivers."

He also told me that no work has been done since, and nobody really knows what the status quo is.

On the other hand a 2006 Fraser Institute publication, Fraser Alert, states: "Overall, the risk of escaped salmon detrimentally affecting wild stocks in BC is currently low." (2)

The question is this: Who do you trust? (3)

NOTES AND REFERENCES
(1) http://www.johnvolpe.ca/ (Accessed: 6 Apr 2017)
(2) https://www.fraserinstitute.org/sites/default/files/Escaped_Farmed_Salmon.pdf (Accessed: 6 Apr 2017). The Fraser Institute is a conservative "think tank". Fraser Alert is not a peer-reviewed publication. This paper was penned by a group of scientists from the University of British Columbia, the Norwegian Institute for Nature Research, and the University of Glasgow. One of the authors, Scott McKinley, was the Executive Scientific Director of AquaNet.
(3) The existence of viable Atlantic salmon populations on the Pacific coast is not a trivial matter, both ecologically and economically. It is curious that in a whole decade no work should have been done on this problem. Why would that be?

27 April 2017

Why I write


Someone recently asked me why I write. It is a good question (1). 

In 1946 George Orwell wrote a short essay to answer it (2). He proposed "four great motives for writing" that exist in every writer -- sheer egoism, aesthetic enthusiasm, historical impulse, and political purpose. 

Where do I stand?

I am an only child and an introvert by nature and by nurture (3). Given a choice between being with people and being alone (with my lovely wife), I can think of no situation where I would choose people. Consequently, I have little need for external recognition, and that is what Orwell's "sheer egoism" really is (4). I also have no desire to tell other people what to think, to push a "political purpose".

Aesthetics, on the other hand, is important to me. Not necessarily phonetic aesthetics, but the aesthetics of a good story or a good argument (5). There is beauty in having formulated a thought in clear and concise language. An expression with no uncertain meaning, a sentence with no unnecessary words, a paragraph with no unnecessary sentences (6). 

I believe my strongest Orwellian motive by far is "historical impulse": I write to make sense of reality. I write to clarify my own thoughts to myself. I write to examine my own personality (7). But to be sure: Although writing brings me great joy, good writing is hard work, and even the most disciplined amongst us often fail (8). 

But if I am writing for myself, why do I publish?

Publishing, especially publishing with no editor and no peer review, enforces the discipline to be concise and to finish a thought. It also enforces intellectual rigour with no shortcuts in the argument. Moreover, because I mostly write on weekends and always post on Thursdays, publishing enforces a certain patience, which I have come to enjoy.  

My readers tell me that they like what they read. They say it makes them think. As an intellectual this pleases me, for I do want to make people think -- think before they speak, think before they act, think before they vote. 

Maybe, after all, I am not writing solely for myself. Maybe the absence of political purpose is a political purpose in itself.

NOTES AND REFERENCES
(1) I was a terrible writer until I was twenty, and a bad writer until I was forty. My school-day writings shall only be remembered by this abomination: "And they couldn't find his damned legs." I stole it from First Blood. The movie, not the book. My late apologies to Dr. Brunhilde Ulamec, my Grade 12 German teacher. 
(2) G. Orwell (1946), Why I write: http://gutenberg.net.au/ebooks03/0300011h.html#part47 (Accessed: 27 Apr 2017)
(3) In a society that lacks civility as ours does, introversion is a form of retreat.
(4) Compare the pitiful number of clicks even my most popular writings receive to the number thumbs-ups of even the tritest piece from LinkedIn-fluencers. If ostentation is my goal, I have failed miserably. 
(5) The boldest first sentence I ever read in a novel comes from Anthony Burgess (1980), Earthly Powers: "It was the afternoon of my eighty-first birthday, and I was in bed with my catamite when Ali announced that the archbishop had come to see me." The finest logical argument I ever read comes from Ludwig Wittgenstein (1922), Tractatus Logico-Philosophicus (http://www.kfs.org/jonathan/witt/ten.html (Accessed: 27 Apr 2017)): Proposition "5.6 The limits of my language mean the limits of my world." 
(6) W. Shrunk Jr. and E. B. White (1979), The Elements of Style (Fourth Edition): Rule 17. Omit needless words.
(7) Socrates's words in Plato (ca. 399 B.C.E.), Apology: "[T]he unexamined life is not worth living."
(8) To paraphrase B. Pascal (1656): "I wrote you a long letter, because I didn't have time to write a short one." If I am writing a 500-word piece, and it doesn't take me at least two whole days, I am not working hard. 

23 March 2017

The fish that weren't there


When my daughter Phoebe was in Grade 3 or 4, her class collaborated with a Grade 7 class in a project called Salmonids in the Classroom (1). The project was (and still is) supported by Fisheries and Oceans Canada, and the idea behind it is that raising salmon in the classroom will teach students a little bit about science, among other things.

Every school day a few Grade 3ers would walk over to the Grade 7ers and take a few scientific observations. And since I was working in Fisheries Oceanography at the time, one day I asked whether I could accompany Phoebe and her three classmates. 

So we walked over, each of them carrying a sheet with instructions. First, they had to measure the water temperature and write it down, which they all did. Then, they had to determine the pH of the water. Of course, none of the Grade 3ers, or the Grade 7ers for that matter, knew what a pH was, but they had learned how to use pH test strips for litmus testing and how to compare them to the colour chart, and they did it well.

Then they sat down in front of the fish tank and continued their assignment, which was this: In the space below, draw what you see. So, the three girls and one boy began to draw the little fish, which were supposed to be in the fry stage.

The problem was that there was not a single fish in the tank (2). 

"What are you doing?" I asked.
"We are drawing fish," Phoebe answered without even looking up.
"But you are supposed to draw what you see." 
"We know."
"But there are no fish in the tank."
"Believe me," Phoebe said. "We are supposed to draw little fish, and that's what we are doing."
"Aren't we supposed to draw fish?" the boy asked me.
"No," I said. "You are supposed to draw what you see."

After ten minutes the three girls (3) had finished drawing little fishes, and we returned to the Grade 3 classroom. All four of them handed their assignments to the teacher, and that was it.

Except that a few minutes later the boy was called to the teacher and was publicly reprimanded for having failed to complete the assignment. He didn't argue. He just stood there nodding in agreement to the admonition.

I walked over to the teacher and explained that there were no fish in the tank, and consequently all that they should have drawn was an empty fish tank.

A few questions came to my mind: Why did the girls draw fish that weren't there? Why didn't they listen to me? Why did the boy believe me? Why did the teacher jump to conclusions? Why didn't the boy defend himself? Why didn't the girls defend the boy? Why didn't the teacher reprimand the girls who had failed to complete the task correctly?

But there looms a larger questions: How often do you and I draw fish that aren't there?

NOTES AND REFERENCES
(1) http://www.salmonidsintheclassroom.ca/index.html (Accessed: 23 Mar 2017)
(2) Later I learned that the fish had been released two days earlier and nobody had bothered to inform Phoebe's class.
(3) When I wrote this, I realized how much I resent the fact that it was the boy who was disobedient and not one of the girls. 

09 March 2017

Budget Day or The Tale of the Villagers and the Pie

Every year on her birthday, the queen would send a royal pie to every village in the country. It wasn't a big pie. It wasn't a fancy pie. And it didn't even look royal. 

Every year the villagers would gather on the village green, and every year the mayor cut the royal pie so that everyone could enjoy their fair piece.

And so she proceeded to hand a piece to the baker.

"Hold on," said the baker. "That's a rather small piece. I am the baker. I bake bread for the village. And without bread the villagers would all starve. I deserve a bigger piece of pie."

"You're right," said the mayor. And she proceeded to hand the piece to the cobbler.

"Hold on," said the cobbler. "That's a rather small piece. I am the cobbler. I make the shoes for the village. And without shoes the villagers could not go about their business. I deserve a bigger piece of pie."

"You're right," said the mayor again. And she proceeded to hand the piece to the doctor.

"Hold on," said the doctor. "That's a rather small piece. I am the doctor. I take care of the sick in the village. And without my care the sick would die. I deserve a bigger piece of pie."

And on and on it went. The butcher, the grocer, the blacksmith, the farmer, the teacher, the barber, the soldier, the tailor, the lawyer, the sailor, the banker, the builder, nobody wanted to take the piece.

"That's enough!" cried the mayor. "Everybody wants a bigger piece of the pie. But if any one of you gets a bigger piece that means that somebody else must get a smaller one."

"Mayor!!" the villagers cried in unison. "You should have gotten us a bigger pie. And since you didn't do your job, you should get the smaller piece."

"Hold on," interrupted the bookkeeper. "We had the same situation last year."

"Aha!!" the villagers cried again in unison. "And then what did we do?"

The bookkeeper studied his notes and said: "The philosopher told us that we are all selfish, and that the mayor's job is to distribute the pie fairly amongst the villagers, just as it is the queen's job is to distribute the pies fairly amongst the mayors."

"It all doesn't look fair to me!!" cried the villagers a third time in unison. "Let's ask the philosopher again."

"The philosopher?" said the mayor. "We cut his piece of pie last year. He doesn't live here anymore."