30 April 2017

The fish that were there (but didn't exist)


In 2001 and 2002 I was a postdoctoral fellow with AquaNet, one of the Networks of Centres of Excellence. AquaNet sponsored "39 research projects devoted to improving the country's aquaculture industry" (1). It's Board of Directors consisted of partners from academia, government, and industry.

For us at the University of British Columbia the question was this: When Atlantic salmon escape from B.C. fish farms, what are the chances that they establish viable populations on the Pacific coast? This question can be broken down into chances of breeding success, of juvenile survival, and of adult survival. I explored the question whether juvenile Pacific salmon and juvenile Atlantic salmon show different susceptibilities to predators.

For my experiments, I had to simulate a small creek in the laboratory. I set up three experimental arenas, large oval channels filled with water about 60 cm deep, pebbles and rocks of various sizes on the bottom. In April, I stocked each tank with 20 juvenile Pacific salmon and 20 juvenile Atlantic salmon, all about 30 mm long. I also stocked two of the tanks with two predators each, two adult steelhead trout of about 50 cm.

Twice a week I went into the lab, fished out all the juveniles from the experimental arenas, measured their length, weighed them, put them back, and restocked those juveniles that had been eaten by the steelheads, or gone missing otherwise.

The experiments did not go well. Yes, steelheads ate juvenile Atlantics slightly more frequently than Pacifics, but they didn't eat them frequently enough to infer a statistically significant difference (2).

In early July I abandoned the experiments. I left the experimental arenas intact, however, and informed the laboratory staff to feel free and help themselves to the steelheads for their summer barbeques.

When I returned in early October (3) to clear the arenas I was surprised to see that in one arena eleven juvenile salmon had survived and grown in length to about 12 to 14 cm. Nine of them were Pacifics, two were Atlantics.

That's when it struck me.

I immediately made my way to the principal investigator. He also directed experiments investigating spawning ground competition and food competition. The Pacifics had always won against the Atlantics.

"We have looked at the problem the wrong way," I said. "The issue is not how well the average Atlantic performs against the average Pacific, but how well the fittest Atlantics perform against the unfittest surviving Pacifics. The problem of invasive species is not an ecological problem. It is an evolutionary one."

The principal investigator looked at me for a while and then leaned forward at his desk.

"Michael," he said without menace. "We will have an AquaNet progress meeting before Christmas. Some of the directors will be there. What you have to understand is that nobody in AquaNet wants to hear any ideas that could shed a bad light on the aquaculture industry (4). Do you understand?"

I didn't.

You see, the purpose of Science is the pursuit of truth, not to serve political expediency. Yes, there are philosophical problems. Yes, we do have battles between schools of thought. Yes, causation is difficult to prove, and truth is always only provisional. But if you can't trust a scientist, who can you trust?

I went back to the lab that afternoon to dispose of the evidence. I sat down for a while and watched the two Atlantics swim around the pool. The denial of their existence had made me oddly fond of them.

I killed them with a bleeding heart. 

NOTES AND REFERENCES
(1) AquaNet ran from 1999 to 2006. It is interesting that although at the time AquaNet was quite a prestigious project, some fifteen years later it is hard to find any detailed information about it: http://www.nce-rce.gc.ca/Index_eng.asp (Accessed: 30 Mar 2017), http://www.nce-rce.gc.ca/_docs/reports/annual-annuel/Annual_Report_02-03_Rapport_Annuel-e.pdf (Accessed: 30 Mar 2017)
(2) Each adult steelhead trout ate one or two juvenile salmon per week. Before we decided on steelheads as a predator, we conducted preliminary experiments with cormorants. They were too efficient. It took four of them less than ten seconds to clear twenty juvenile Pacifics from a large holding tank.
(3) After the 9/11 attacks the cleaning of fish tanks was not a priority.
(4) To my knowledge there is no evidence that suggests the establishment of a viable Atlantic salmon population on the Pacific coast. But that does not mean that one day life will not find a way.


UPDATE, 6 APR 2017

In the meantime I have spoken to John Volpe from the University of Victoria(1). John is a specialist in Invasion Ecology. He and I first met during my time with AquaNet.

John told me that about a decade ago he had evidence "of multiple year classes of wild-reared Atlantics in multiple Van Island rivers. They were competitively equal to or superior to native juvenile salmonids and in some instances very numerous. Adults were prevalent in dozens of rivers."

He also told me that no work has been done since, and nobody really knows what the status quo is.

On the other hand a 2006 Fraser Institute publication, Fraser Alert, states: "Overall, the risk of escaped salmon detrimentally affecting wild stocks in BC is currently low." (2)

The question is this: Who do you trust? (3)

NOTES AND REFERENCES
(1) http://www.johnvolpe.ca/ (Accessed: 6 Apr 2017)
(2) https://www.fraserinstitute.org/sites/default/files/Escaped_Farmed_Salmon.pdf (Accessed: 6 Apr 2017). The Fraser Institute is a conservative "think tank". Fraser Alert is not a peer-reviewed publication. This paper was penned by a group of scientists from the University of British Columbia, the Norwegian Institute for Nature Research, and the University of Glasgow. One of the authors, Scott McKinley, was the Executive Scientific Director of AquaNet.
(3) The existence of viable Atlantic salmon populations on the Pacific coast is not a trivial matter, both ecologically and economically. It is curious that in a whole decade no work should have been done on this problem. Why would that be?

27 April 2017

Why I write


Someone recently asked me why I write. It is a good question (1). 

In 1946 George Orwell wrote a short essay to answer it (2). He proposed "four great motives for writing" that exist in every writer -- sheer egoism, aesthetic enthusiasm, historical impulse, and political purpose. 

Where do I stand?

I am an only child and an introvert by nature and by nurture (3). Given a choice between being with people and being alone (with my lovely wife), I can think of no situation where I would choose people. Consequently, I have little need for external recognition, and that is what Orwell's "sheer egoism" really is (4). I also have no desire to tell other people what to think, to push a "political purpose".

Aesthetics, on the other hand, is important to me. Not necessarily phonetic aesthetics, but the aesthetics of a good story or a good argument (5). There is beauty in having formulated a thought in clear and concise language. An expression with no uncertain meaning, a sentence with no unnecessary words, a paragraph with no unnecessary sentences (6). 

I believe my strongest Orwellian motive by far is "historical impulse": I write to make sense of reality. I write to clarify my own thoughts to myself. I write to examine my own personality (7). But to be sure: Although writing brings me great joy, good writing is hard work, and even the most disciplined amongst us often fail (8). 

But if I am writing for myself, why do I publish?

Publishing, especially publishing with no editor and no peer review, enforces the discipline to be concise and to finish a thought. It also enforces intellectual rigour with no shortcuts in the argument. Moreover, because I mostly write on weekends and always post on Thursdays, publishing enforces a certain patience, which I have come to enjoy.  

My readers tell me that they like what they read. They say it makes them think. As an intellectual this pleases me, for I do want to make people think -- think before they speak, think before they act, think before they vote. 

Maybe, after all, I am not writing solely for myself. Maybe the absence of political purpose is a political purpose in itself.

NOTES AND REFERENCES
(1) I was a terrible writer until I was twenty, and a bad writer until I was forty. My school-day writings shall only be remembered by this abomination: "And they couldn't find his damned legs." I stole it from First Blood. The movie, not the book. My late apologies to Dr. Brunhilde Ulamec, my Grade 12 German teacher. 
(2) G. Orwell (1946), Why I write: http://gutenberg.net.au/ebooks03/0300011h.html#part47 (Accessed: 27 Apr 2017)
(3) In a society that lacks civility as ours does, introversion is a form of retreat.
(4) Compare the pitiful number of clicks even my most popular writings receive to the number thumbs-ups of even the tritest piece from LinkedIn-fluencers. If ostentation is my goal, I have failed miserably. 
(5) The boldest first sentence I ever read in a novel comes from Anthony Burgess (1980), Earthly Powers: "It was the afternoon of my eighty-first birthday, and I was in bed with my catamite when Ali announced that the archbishop had come to see me." The finest logical argument I ever read comes from Ludwig Wittgenstein (1922), Tractatus Logico-Philosophicus (http://www.kfs.org/jonathan/witt/ten.html (Accessed: 27 Apr 2017)): Proposition "5.6 The limits of my language mean the limits of my world." 
(6) W. Shrunk Jr. and E. B. White (1979), The Elements of Style (Fourth Edition): Rule 17. Omit needless words.
(7) Socrates's words in Plato (ca. 399 B.C.E.), Apology: "[T]he unexamined life is not worth living."
(8) To paraphrase B. Pascal (1656): "I wrote you a long letter, because I didn't have time to write a short one." If I am writing a 500-word piece, and it doesn't take me at least two whole days, I am not working hard.